BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021G05SP1|AL427809
(732 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig726 1298 0.0
>3x_Contig726
Length = 2931
Score = 1298 bits (644), Expect = 0.0
Identities = 709/734 (96%), Gaps = 6/734 (0%)
Strand = Plus / Plus
Query: 1 tgggttccgttgctggtgatcgttgtatgagacatactgtcatcgtctgawtagtcctgg 60
|||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||
Sbjct: 1240 tgggttccgttgctgg-gatcgttgtatgagaca-actg-catcgtctgaatagtcctgg 1296
Query: 61 taacctgtgttcatagcgtcattaagtaataccaccaccgtattgtttgaagtggcgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 taacctgtgttcatagcgtcattaagtaataccaccaccgtattgtttgaagtggcgtat 1356
Query: 121 ttakttatggtgacaagcaattgtwtcaaacttttcaccttgaaatcgtgcaaggtctgt 180
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1357 ttagttatggtgacaagcaattgtatcaaacttttcaccttgaaatcgtgcaaggtctgt 1416
Query: 181 cgatggttagaatatccactgttcttctcgtacatatggwgatactctaccaaaagctga 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1417 cgatggttagaatatccactgttcttctcgtacatatggagatactctaccaaaagctga 1476
Query: 241 gataaaccatcgattattatgagcccgtacgtctcttttaawttctgaaacatgtaccac 300
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1477 gataaaccatcgattattatgagcccgtacgtctcttttaaattctgatacatgtaccac 1536
Query: 301 agttgwgcaaatttcttcactcttgygtattggcaccctttgaw-atggacttcgtcctc 359
||||| ||||||||||||||||||| | ||||||||||||||| |||||||||||||||
Sbjct: 1537 agttgagcaaatttcttcactcttgcgaattggcaccctttgaacatggacttcgtcctc 1596
Query: 360 atctccttgctctataagcttcagtggtacttgctggaacgtgtcaatccacagacattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 atctccttgctctataagcttcagtggtacttgctggaacgtgtcaatccacagacattt 1656
Query: 420 catcctattctgattattgttcactaattgtaccgcgaactttgtcttgccaattcctgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 catcctattctgattattgttcactaattgtaccgcgaactttgtcttgccaattcctgg 1716
Query: 480 aggtccgtaaacctcgtwgatactctgktggttggwatccgtcattcwwtkaatcgtcta 539
||||||||||||||||| ||||||||| ||||||| ||||||||||| | |||||||||
Sbjct: 1717 aggtccgtaaacctcgtagatactctg-tggttggaatccgtcattcaatgaatcgtcta 1775
Query: 540 aactctcaatgccacttcgtacatgatctgcacgcgcttgtatcagttgagacaaaggta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 aactctcaatgccacttcgtacatgatctgcacgcgcttgtatcagttgagacaaaggta 1835
Query: 600 caccaaatgacattagaatgctatywactaatcaccaaacgcgtccacagtttctcctgk 659
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1836 caccaaatgacattagaatgctatcaactaatcaccaaacgcgtccacagtttctcctgg 1895
Query: 660 ttcttcaagcctttcaagactatgtataactagccttttaaatccgcataattcaccttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 ttcttcaagcctttcaagactatgtataactagccttttaaatccgcataattcaccttt 1955
Query: 720 a-gtgtaaytaaaa 732
| |||||| |||||
Sbjct: 1956 aggtgtaactaaaa 1969
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3175
Number of Sequences: 1807
Number of extensions: 3175
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 732
length of database: 10,358,551
effective HSP length: 16
effective length of query: 716
effective length of database: 10,329,639
effective search space: 7396021524
effective search space used: 7396021524
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)